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Intron Name: Anas_platyrhynchos_platyrhynchos_14_12666117_12667034_F


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
12666117 - 12667034

Intron Length:
918

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TGT|GTAAGTAGT

5'SS Class:
major

3'SS Sequence:
TTCTCTGTGCTAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GCATAAC

U12 Branch Point Sequence:
TTTTTCTTCTCC

Flanking Amino Acid:
PSRKSVTKMLFVLVMVFAVC

Intron Amino Acid Position:
269

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
75.7
0.61
1.1
74.7
41.5

Major BPS
49
-0
1.3
51.9
39.9

Major PPT
70.1
0.45
1
65.3
41.1

Minor 5ss
39.4
-1.2
2.9
52.3
44.3

Minor BPS
46.4
-0.2
3.6
77.51
38.8

Associated Gene:

Gene:
NMUR2

Ensembl Gene ID:

Chromosome:
14

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

12660657 - 12668353
7697