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Intron Name: Anas_platyrhynchos_platyrhynchos_14_12834595_12841684_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12834595 - 12841684

Intron Length:

7090

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

TTACACCATGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTTAC

U12 Branch Point Sequence:

CCCTGCTTACAC

Flanking Amino Acid:

SFGSIAETTMDYRVNIFLRQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.8

79.4

28.8

Major BPS

66.4

0.41

1.1

57.4

41.4

Major PPT

69.8

0.45

63.2

Minor 5ss

32.1

-2

3.1

36.8

41.9

Minor BPS

44.5

-0.4

2.1

50.43

46.5

Associated Gene:

Gene:

GLRA1

Ensembl Gene ID:

ENSAPLG00000007106

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007387

12814576 - 12849813

35238

ENSAPLT00000023302

12814943 - 12850603

35661