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Intron Name: Anas_platyrhynchos_platyrhynchos_14_12843569_12844539_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12843569 - 12844539

Intron Length:

971

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTGAGTCCT

5'SS Class:

major

3'SS Sequence:

ATCCTCCCAACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

ATTTATTTCACA

Flanking Amino Acid:

VQTCIMQLESFGYTMNDLIF

Intron Amino Acid Position:

188

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.8

0.47

1.1

64.8

40.9

Major BPS

88.7

0.96

0.8

36.5

Major PPT

68.6

0.42

0.9

62.9

32.5

Minor 5ss

34.3

-1.8

3.1

52.6

43.7

Minor BPS

58.6

0.27

1.9

74.53

Associated Gene:

Gene:

GLRA1

Ensembl Gene ID:

ENSAPLG00000007106

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007387

12814576 - 12849813

35238

ENSAPLT00000023302

12814943 - 12850603

35661