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Intron Name: Anas_platyrhynchos_platyrhynchos_14_12867423_12867801_R


Intron Information:

Intron Rank:
9

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
12867423 - 12867801

Intron Length:
379

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAA|GTAAGAAAA

5'SS Class:
strong_major

3'SS Sequence:
TTTTATGTTCAAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTCTTAA

U12 Branch Point Sequence:
TTTTCTTAAACT

Flanking Amino Acid:
NIPPQRGPRPIREGEQGDVE

Intron Amino Acid Position:
319

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
82.7
0.77
0.9
79.7
27.9

Major BPS
82.2
0.8
0.8
71.9
35.8

Major PPT
73.7
0.53
1.1
71.8
42.8

Minor 5ss
34.5
-1.8
3
40.8
39.4

Minor BPS
79.4
1
1.5
95.57
31.2

Associated Gene:

Gene:
G3BP1

Ensembl Gene ID:

Chromosome:
14

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

12865126 - 12873242
8117

12865417 - 12885287
19871