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Intron Name: Anas_platyrhynchos_platyrhynchos_14_12868512_12869213_R


Intron Information:

Intron Rank:
7

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
12868512 - 12869213

Intron Length:
702

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AGG|GTAATGACA

5'SS Class:
major

3'SS Sequence:
TTCATTTTTTTAG|A

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TCTTCAT

U12 Branch Point Sequence:
AGCACCTGAAGT

Flanking Amino Acid:
PAPAVQEDSRTFSWASVTSK

Intron Amino Acid Position:
248

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
70.9
0.49
1.1
65.1
40.5

Major BPS
87.4
0.93
0.9
87.9
29.5

Major PPT
85.3
0.79
0.7
84.6
30.1

Minor 5ss
32.2
-2
3
32.9
41.8

Minor BPS
49.5
0.04
1.8
65.05
44.8

Associated Gene:

Gene:
G3BP1

Ensembl Gene ID:

Chromosome:
14

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

12865126 - 12873242
8117

12865417 - 12885287
19871