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Intron Name: Anas_platyrhynchos_platyrhynchos_14_12915251_12915356_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12915251 - 12915356

Intron Length:

106

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTGGG

5'SS Class:

strong_major

3'SS Sequence:

GCCTGGCTTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAG

U12 Branch Point Sequence:

TGGTGCTGAGCG

Flanking Amino Acid:

LHLDYIGPCKFIPACLDTEL

Intron Amino Acid Position:

129

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

69.1

41.9

Major BPS

52.2

0.06

1.6

51.1

46.3

Major PPT

69.3

0.43

60.9

40.2

Minor 5ss

34.5

-1.8

3.3

44.8

43.4

Minor BPS

45.4

-0.4

2.1

53.1

47.1

Associated Gene:

Gene:

SPARC

Ensembl Gene ID:

ENSAPLG00000006120

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021338

12913690 - 12917317

3628

ENSAPLT00000006368

12913690 - 12916629

2940