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Intron Name: Anas_platyrhynchos_platyrhynchos_14_12915491_12915728_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12915491 - 12915728

Intron Length:

238

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGGCT

5'SS Class:

strong_major

3'SS Sequence:

TCTCCCACGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCACAT

U12 Branch Point Sequence:

TGCCCCTCACAT

Flanking Amino Acid:

NLLTEKQKLKVKKIHENEKR

Intron Amino Acid Position:

174

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.9

75.6

33.8

Major BPS

65.3

0.38

1.1

72.6

33.1

Major PPT

67.2

0.39

62.7

Minor 5ss

26.4

-2.7

3.5

38.5

46.7

Minor BPS

46.7

-0.1

1.9

64.05

45.5

Associated Gene:

Gene:

SPARC

Ensembl Gene ID:

ENSAPLG00000006120

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021338

12913690 - 12917317

3628

ENSAPLT00000006368

12913690 - 12916629

2940