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Intron Name: Anas_platyrhynchos_platyrhynchos_14_12954976_12955188_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

12954976 - 12955188

Intron Length:

213

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTGTATGGG

5'SS Class:

weak_major

3'SS Sequence:

ATTAAGGATAAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CATTAAG

U12 Branch Point Sequence:

CTGGCATTAAGG

Flanking Amino Acid:

NAAWDIQCASLDLSALDPSQ

Intron Amino Acid Position:

1097

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

50.2

0.01

1.1

42.4

38.6

Major BPS

55.5

0.14

1.5

65.3

38.6

Major PPT

49.3

-0

1.2

45.4

44.5

Minor 5ss

-1.7

3.3

48.4

47.7

Minor BPS

46.7

-0.3

2.1

51.77

48.5

Associated Gene:

Gene:

FAT2

Ensembl Gene ID:

ENSAPLG00000005340

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005534

12946604 - 12996969

50366