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Intron Name: Anas_platyrhynchos_platyrhynchos_14_12966311_12967707_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

12966311 - 12967707

Intron Length:

1397

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTA|GTAGAAACC

5'SS Class:

weak_major

3'SS Sequence:

TGACATCAACCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATGTGAT

U12 Branch Point Sequence:

TTGACATCAACC

Flanking Amino Acid:

IKTQVILSALHRPQFLESHY

Intron Amino Acid Position:

1361

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

54.3

0.1

1.1

52.2

37.2

Major BPS

72.4

0.56

1.2

63.1

44.4

Major PPT

57.1

0.16

1.1

48.8

43.6

Minor 5ss

34.6

-1.8

3.3

45.5

37.7

Minor BPS

54.6

0.12

1.9

69.11

41.8

Associated Gene:

Gene:

FAT2

Ensembl Gene ID:

ENSAPLG00000005340

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005534

12946604 - 12996969

50366