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Intron Name: Anas_platyrhynchos_platyrhynchos_14_12967954_12968375_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12967954 - 12968375

Intron Length:

422

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTCCT

5'SS Class:

strong_major

3'SS Sequence:

CCCTGTCATCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTCAT

U12 Branch Point Sequence:

GTGACCATACCT

Flanking Amino Acid:

PMPQHTLTVMVRDQEVPIKR

Intron Amino Acid Position:

1443

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

73.2

37.4

Major BPS

72.5

0.56

1.2

39.9

Major PPT

70.4

0.46

0.9

61.3

39.2

Minor 5ss

31.6

-2.1

2.9

39.6

39.8

Minor BPS

49.6

0.05

70.68

45.5

Associated Gene:

Gene:

FAT2

Ensembl Gene ID:

ENSAPLG00000005340

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005534

12946604 - 12996969

50366