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Intron Name: Anas_platyrhynchos_platyrhynchos_14_12975661_12976955_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12975661 - 12976955

Intron Length:

1295

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGACAT

5'SS Class:

strong_major

3'SS Sequence:

CTGTCCTTGCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAGAT

U12 Branch Point Sequence:

GTTTAGATACCA

Flanking Amino Acid:

INDNSPECGQIFYTGRVSED

Intron Amino Acid Position:

2930

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.1

0.97

0.8

80.7

33.7

Major BPS

79.2

0.72

Major PPT

71.7

0.49

65.2

41.1

Minor 5ss

33.6

-1.9

3.2

47.4

Minor BPS

42.1

-0.6

2.5

62.13

43.5

Associated Gene:

Gene:

FAT2

Ensembl Gene ID:

ENSAPLG00000005340

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005534

12946604 - 12996969

50366