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Intron Name: Anas_platyrhynchos_platyrhynchos_14_12977110_12977518_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12977110 - 12977518

Intron Length:

409

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGACCT

5'SS Class:

strong_major

3'SS Sequence:

TTCCTTCCCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTGCAG

U12 Branch Point Sequence:

GGAGCCAAGACC

Flanking Amino Acid:

AEEFRLGPHTGELTTSAPLD

Intron Amino Acid Position:

2981

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.8

74.2

36.1

Major BPS

43.4

-0.4

1.8

57.1

49.4

Major PPT

81.1

0.7

76.1

26.1

Minor 5ss

29.2

-2.4

3.1

45.5

Minor BPS

42.6

-0.6

49.09

40.8

Associated Gene:

Gene:

FAT2

Ensembl Gene ID:

ENSAPLG00000005340

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005534

12946604 - 12996969

50366