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Intron Name: Anas_platyrhynchos_platyrhynchos_14_12978932_12980636_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12978932 - 12980636

Intron Length:

1705

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGACAG

5'SS Class:

strong_major

3'SS Sequence:

TCTGCCCATGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTAAA

U12 Branch Point Sequence:

TTCTGCCCATCT

Flanking Amino Acid:

HGKFQLNSNTGALYINGSLD

Intron Amino Acid Position:

3189

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.7

0.91

0.9

71.6

40.1

Major BPS

81.6

0.78

0.8

24.9

Major PPT

72.8

0.51

0.9

66.4

34.7

Minor 5ss

31.3

-2.1

3.1

38.3

46.6

Minor BPS

43.3

-0.4

2.4

68.76

47.7

Associated Gene:

Gene:

FAT2

Ensembl Gene ID:

ENSAPLG00000005340

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005534

12946604 - 12996969

50366