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Intron Name: Anas_platyrhynchos_platyrhynchos_14_12981604_12981646_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

12981604 - 12981646

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAA|GCATCTGGA

5'SS Class:

major

3'SS Sequence:

AAAATGGAAACAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AGTTCAA

U12 Branch Point Sequence:

AGTTCAAGAAAA

Flanking Amino Acid:

QPKSGQISIAKKIKIDVSQK

Intron Amino Acid Position:

3300

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.2

0.29

1.3

59.4

42.5

Major BPS

66.8

0.42

1.1

69.4

37.7

Major PPT

47.9

-0.1

1.1

36.7

43.2

Minor 5ss

35.1

-1.7

4.1

48.4

45.8

Minor BPS

44.9

-0.3

60.01

38.3

Associated Gene:

Gene:

FAT2

Ensembl Gene ID:

ENSAPLG00000005340

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005534

12946604 - 12996969

50366