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Intron Name: Anas_platyrhynchos_platyrhynchos_14_13008413_13009636_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13008413 - 13009636

Intron Length:

1224

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTCTC

5'SS Class:

strong_major

3'SS Sequence:

CCTCCTCTCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCTCCAT

U12 Branch Point Sequence:

TGCTGCTCCATC

Flanking Amino Acid:

AIFAFEGIGVVLPLENKMKN

Intron Amino Acid Position:

303

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.9

0.89

0.9

77.9

36.8

Major BPS

48.8

-0

1.5

60.4

45.8

Major PPT

76.8

0.6

0.8

68.3

31.9

Minor 5ss

38.9

-1.2

50.6

40.1

Minor BPS

43.3

-0.5

2.3

54.76

43.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004805

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004975

12999052 - 13012816

13765

ENSAPLT00000040597

12998843 - 13012816

13974