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Intron Name: Anas_platyrhynchos_platyrhynchos_14_13009736_13009912_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13009736 - 13009912

Intron Length:

177

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTACGTGTG

5'SS Class:

major

3'SS Sequence:

TTTTTTTTCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTCAA

U12 Branch Point Sequence:

TGCTGCTCAACT

Flanking Amino Acid:

LVVIYQYIVRDIPDPSNLPL

Intron Amino Acid Position:

270

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.6

0.63

1.1

67.3

44.3

Major BPS

70.6

0.51

1.1

71.6

36.4

Major PPT

93.7

0.98

0.6

88.2

29.1

Minor 5ss

34.8

-1.7

3.4

40.1

45.9

Minor BPS

57.9

0.33

76.98

45.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004805

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017339

13009650 - 13021388

11739

ENSAPLT00000004975

12999052 - 13012816

13765

ENSAPLT00000040597

12998843 - 13012816

13974