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Intron Name: Anas_platyrhynchos_platyrhynchos_14_13010132_13011164_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13010132 - 13011164

Intron Length:

1033

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGCTT

5'SS Class:

strong_major

3'SS Sequence:

TCTGCTTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTCGAT

U12 Branch Point Sequence:

GCTTCCTGGAGC

Flanking Amino Acid:

FVFLADNLRQVVSAANDTTT

Intron Amino Acid Position:

197

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.6

0.86

0.9

78.6

37.3

Major BPS

49.5

-0

1.3

49.7

Major PPT

77.2

0.61

0.8

69.1

Minor 5ss

31.2

-2.1

3.5

46.7

48.6

Minor BPS

52.4

0.06

1.8

63.22

42.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004805

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040597

12998843 - 13012816

13974

ENSAPLT00000017339

13009650 - 13021388

11739

ENSAPLT00000004975

12999052 - 13012816

13765