Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_14_13011250_13011507_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13011250 - 13011507

Intron Length:

258

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACCTGAG

5'SS Class:

major

3'SS Sequence:

TTCTCTTTGCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTACAT

U12 Branch Point Sequence:

ACATCTCTGACG

Flanking Amino Acid:

AWLRTHAVWGRRVVGLFLIL

Intron Amino Acid Position:

168

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.5

0.51

1.2

63.4

43.1

Major BPS

0.37

1.3

Major PPT

76.9

0.61

0.9

37.4

Minor 5ss

36.5

-1.5

3.4

48.8

47.4

Minor BPS

49.4

-0.1

1.7

54.03

41.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004805

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004975

12999052 - 13012816

13765

ENSAPLT00000040597

12998843 - 13012816

13974

ENSAPLT00000017339

13009650 - 13021388

11739