Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_14_13029541_13029711_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13029541 - 13029711

Intron Length:

171

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGCGCGCC

5'SS Class:

major

3'SS Sequence:

TGTCCCCCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTCAT

U12 Branch Point Sequence:

ATGCCGGTGACA

Flanking Amino Acid:

LRREHEETLQELRRAHEQEK

Intron Amino Acid Position:

328

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.3

0.57

60.4

39.1

Major BPS

82.3

0.8

0.9

81.8

30.8

Major PPT

77.2

0.61

0.8

70.2

30.7

Minor 5ss

31.1

-2.2

3.4

41.9

45.1

Minor BPS

42.8

-0.5

2.6

57.8

41.9

Associated Gene:

Gene:

CCDC69

Ensembl Gene ID:

ENSAPLG00000022330

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036038

13024661 - 13031100

6440