Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_14_13041247_13041459_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13041247 - 13041459

Intron Length:

213

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGA|GTAAGACCT

5'SS Class:

major

3'SS Sequence:

CCTCCCCTCGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTCAC

U12 Branch Point Sequence:

CGCAGCTCACCG

Flanking Amino Acid:

ALLKLCGGDDDAAGEFFPEA

Intron Amino Acid Position:

324

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.5

0.48

1.1

62.8

41.9

Major BPS

0.28

1.1

63.1

35.8

Major PPT

74.8

0.56

0.7

68.5

Minor 5ss

35.9

-1.6

3.2

46.5

42.3

Minor BPS

37.8

-1

2.1

36.54

45.1

Associated Gene:

Gene:

ANXA6

Ensembl Gene ID:

ENSAPLG00000003352

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018034

13036861 - 13144314

107454

ENSAPLT00000017384

13034043 - 13046311

12269

ENSAPLT00000048433

13034043 - 13046311

12269

ENSAPLT00000003526

13036861 - 13046311

9451

ENSAPLT00000026471

13034043 - 13046311

12269

ENSAPLT00000019375

13034043 - 13046318

12276