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Intron Name: Anas_platyrhynchos_platyrhynchos_14_13061228_13062322_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13061228 - 13062322

Intron Length:

1095

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

CTTCCCTGCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTCAT

U12 Branch Point Sequence:

CTGACCCTAATT

Flanking Amino Acid:

QGFPQDSGRADLEPLPTEDA

Intron Amino Acid Position:

136

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

0.9

68.7

38.1

Major BPS

83.4

0.83

0.8

83.7

25.7

Major PPT

72.3

0.5

0.9

64.8

36.3

Minor 5ss

27.1

-2.6

31.9

42.5

Minor BPS

57.8

0.32

1.8

73.27

43.8

Associated Gene:

Gene:

TNIP1

Ensembl Gene ID:

ENSAPLG00000002442

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025819

13059947 - 13070361

10415

ENSAPLT00000002496

13059947 - 13066775

6829