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Intron Name: Anas_platyrhynchos_platyrhynchos_14_13062515_13062759_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13062515 - 13062759

Intron Length:

245

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTCAA

5'SS Class:

strong_major

3'SS Sequence:

GCTCACCCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTCAC

U12 Branch Point Sequence:

TGGTGCTCACCC

Flanking Amino Acid:

KNEQRTSFLQTLCETLHTEN

Intron Amino Acid Position:

200

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

70.2

37.7

Major BPS

72.4

0.56

73.5

32.5

Major PPT

66.1

0.36

0.9

58.2

32.7

Minor 5ss

26.7

-2.7

2.9

31.1

Minor BPS

45.9

-0.3

2.2

59.13

45.7

Associated Gene:

Gene:

TNIP1

Ensembl Gene ID:

ENSAPLG00000002442

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025819

13059947 - 13070361

10415

ENSAPLT00000002496

13059947 - 13066775

6829