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Intron Name: Anas_platyrhynchos_platyrhynchos_14_13063464_13063607_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13063464 - 13063607

Intron Length:

144

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGGCTT

5'SS Class:

strong_major

3'SS Sequence:

TCCCTGCTGGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCCAAT

U12 Branch Point Sequence:

GTGGCCCCAATG

Flanking Amino Acid:

RAMKQKYEQKMTDVHQELAE

Intron Amino Acid Position:

312

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

73.4

43.3

Major BPS

48.8

-0

1.3

56.3

37.4

Major PPT

68.7

0.42

64.5

36.5

Minor 5ss

35.3

-1.7

3.8

55.3

48.9

Minor BPS

44.5

-0.5

49.03

44.7

Associated Gene:

Gene:

TNIP1

Ensembl Gene ID:

ENSAPLG00000002442

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025819

13059947 - 13070361

10415

ENSAPLT00000002496

13059947 - 13066775

6829