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Intron Name: Anas_platyrhynchos_platyrhynchos_14_13064680_13065075_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13064680 - 13065075

Intron Length:

396

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCAGC

5'SS Class:

strong_major

3'SS Sequence:

CTCTTGCCCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTAAG

U12 Branch Point Sequence:

TCTGCACTAAGC

Flanking Amino Acid:

QKQLVVSNNQLRASKDDCQR

Intron Amino Acid Position:

482

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

72.2

39.5

Major BPS

50.4

0.01

1.5

59.3

35.9

Major PPT

73.9

0.54

0.8

65.2

36.3

Minor 5ss

34.3

-1.8

2.9

44.2

Minor BPS

44.9

-0.4

2.2

60.04

Associated Gene:

Gene:

TNIP1

Ensembl Gene ID:

ENSAPLG00000002442

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025819

13059947 - 13070361

10415

ENSAPLT00000002496

13059947 - 13066775

6829