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Intron Name: Anas_platyrhynchos_platyrhynchos_14_13065661_13068665_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13065661 - 13068665

Intron Length:

3005

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGGCTC

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GATTTAT

U12 Branch Point Sequence:

AGGGATTTATTT

Flanking Amino Acid:

PGVKPVPKDLAGISQRGERP

Intron Amino Acid Position:

604

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.8

0.7

67.8

43.5

Major BPS

70.9

0.52

1.2

63.7

43.9

Major PPT

98.2

1.08

0.5

92.3

26.6

Minor 5ss

34.9

-1.7

3.4

42.7

44.4

Minor BPS

44.5

-0.3

1.8

55.42

41.3

Associated Gene:

Gene:

TNIP1

Ensembl Gene ID:

ENSAPLG00000002442

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025819

13059947 - 13070361

10415