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Intron Name: Anas_platyrhynchos_platyrhynchos_14_13113299_13120555_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13113299 - 13120555

Intron Length:

7257

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGCAAA

5'SS Class:

strong_major

3'SS Sequence:

GCTCTCTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTAAC

U12 Branch Point Sequence:

GCCCCGCTAACC

Flanking Amino Acid:

INPASEPRKASVSRSSSLSE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

33.6

Major BPS

57.1

0.18

1.1

Major PPT

74.1

0.54

0.8

65.3

36.2

Minor 5ss

40.4

-1.1

2.9

48.9

41.5

Minor BPS

-0.4

2.3

53.33

44.1

Associated Gene:

Gene:

SYNPO

Ensembl Gene ID:

ENSAPLG00000024895

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033984

13107643 - 13121142

13500