Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_14_13141564_13141818_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13141564 - 13141818

Intron Length:

255

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAGGTGGC

5'SS Class:

major

3'SS Sequence:

TCCCTCACCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTCAC

U12 Branch Point Sequence:

TCTCCCTCACCC

Flanking Amino Acid:

RRGFIHNGIMVLPRQTCGLF

Intron Amino Acid Position:

475

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.5

0.63

1.1

65.5

39.9

Major BPS

60.1

0.25

1.1

62.9

34.3

Major PPT

70.8

0.47

0.8

62.1

33.3

Minor 5ss

31.8

-2.1

3.4

40.2

41.3

Minor BPS

54.8

0.13

1.9

68.24

43.3

Associated Gene:

Gene:

NDST1

Ensembl Gene ID:

ENSAPLG00000016141

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031952

13136221 - 13145140

8920

ENSAPLT00000016866

13136221 - 13145140

8920