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Intron Name: Anas_platyrhynchos_platyrhynchos_14_13172173_13172403_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13172173 - 13172403

Intron Length:

231

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTCAGTTCT

5'SS Class:

major

3'SS Sequence:

TCTGCTCCTCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

ATGGGATGAATT

Flanking Amino Acid:

EETPKQPPKPAGVLQKAGGT

Intron Amino Acid Position:

574

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.5

0.58

1.3

74.1

37.2

Major BPS

81.8

0.79

1.1

34.5

Major PPT

0.65

0.8

69.8

36.7

Minor 5ss

38.4

-1.3

2.8

48.5

41.3

Minor BPS

-0.4

2.1

60.11

43.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015849

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016528

13166885 - 13182363

15479

ENSAPLT00000016530

13168602 - 13182363

13762