Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_14_13172651_13173029_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13172651 - 13173029

Intron Length:

379

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAACGGCA

5'SS Class:

major

3'SS Sequence:

TTCCTCTCCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTCCAT

U12 Branch Point Sequence:

TGCATTCCATCT

Flanking Amino Acid:

SSGSSTVVGEALPPPCLKQT

Intron Amino Acid Position:

492

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.7

0.61

1.2

66.7

39.1

Major BPS

68.5

0.46

1.2

78.5

35.1

Major PPT

77.9

0.63

0.7

77.2

24.8

Minor 5ss

-1.7

3.5

47.9

47.8

Minor BPS

39.2

-0.7

1.9

53.78

41.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015849

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016530

13168602 - 13182363

13762

ENSAPLT00000016528

13166885 - 13182363

15479