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Intron Name: Anas_platyrhynchos_platyrhynchos_14_13173189_13174722_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13173189 - 13174722

Intron Length:

1534

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGAGC

5'SS Class:

strong_major

3'SS Sequence:

CCATCTATTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTGAT

U12 Branch Point Sequence:

CTGTCCTGATTT

Flanking Amino Acid:

SDEEVVPPTQSLSQQNIRPS

Intron Amino Acid Position:

439

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

70.2

40.3

Major BPS

78.8

0.71

67.6

40.6

Major PPT

76.7

0.6

0.9

73.5

35.4

Minor 5ss

-2.1

3.2

44.2

Minor BPS

0.27

1.8

72.44

44.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015849

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016528

13166885 - 13182363

15479

ENSAPLT00000016530

13168602 - 13182363

13762