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Intron Name: Anas_platyrhynchos_platyrhynchos_14_13174881_13175033_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13174881 - 13175033

Intron Length:

153

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTCTC

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTCCCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTGAT

U12 Branch Point Sequence:

TGCTGATGATCT

Flanking Amino Acid:

PVAQPQPPQAAAKTNAVPQP

Intron Amino Acid Position:

386

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

0.9

36.6

Major BPS

76.2

0.65

1.1

65.3

43.7

Major PPT

87.5

0.84

0.7

81.1

30.9

Minor 5ss

33.5

-1.9

41.5

39.2

Minor BPS

42.5

-0.4

2.2

62.8

46.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015849

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016530

13168602 - 13182363

13762

ENSAPLT00000016528

13166885 - 13182363

15479