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Intron Name: Anas_platyrhynchos_platyrhynchos_14_13179141_13179778_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13179141 - 13179778

Intron Length:

638

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGCGTCTC

5'SS Class:

major

3'SS Sequence:

TTGTCTTCTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTCAC

U12 Branch Point Sequence:

CCTTCTTTCACA

Flanking Amino Acid:

EEEKPPAGPQTKPPPKPSQA

Intron Amino Acid Position:

239

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.6

0.51

66.1

39.8

Major BPS

77.7

0.69

30.2

Major PPT

0.79

0.8

77.5

36.9

Minor 5ss

-1.8

3.2

44.1

37.7

Minor BPS

62.9

0.4

1.8

70.26

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015849

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016530

13168602 - 13182363

13762

ENSAPLT00000016528

13166885 - 13182363

15479