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Intron Name: Anas_platyrhynchos_platyrhynchos_14_13180004_13180493_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

13180004 - 13180493

Intron Length:

490

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACCTCT

5'SS Class:

weak_major

3'SS Sequence:

TTCCCGTTCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTTAC

U12 Branch Point Sequence:

AAGATGTTACCT

Flanking Amino Acid:

EEELATPAVQAKPAVKAVQV

Intron Amino Acid Position:

164

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.9

0.63

1.2

72.3

40.1

Major BPS

62.6

0.31

1.2

55.1

41.7

Major PPT

76.5

0.6

0.8

68.2

37.4

Minor 5ss

57.2

0.24

2.5

74.8

41.2

Minor BPS

43.9

-0.3

2.2

59.53

43.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015849

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016530

13168602 - 13182363

13762

ENSAPLT00000016528

13166885 - 13182363

15479