Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_14_13224753_13225017_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13224753 - 13225017

Intron Length:

265

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACGAGCC

5'SS Class:

strong_major

3'SS Sequence:

CCTCCTCCTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTGCAA

U12 Branch Point Sequence:

TCCTCTGCAACC

Flanking Amino Acid:

QMGVVHRDLKPENLLLASKL

Intron Amino Acid Position:

117

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

67.4

39.1

Major BPS

53.2

0.08

1.4

65.6

41.4

Major PPT

79.1

0.65

0.7

72.8

25.4

Minor 5ss

30.6

-2.2

3.5

42.6

44.4

Minor BPS

-0.1

2.2

61.68

44.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014627

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043116

13214057 - 13235589

21533

ENSAPLT00000038067

13214057 - 13235589

21533

ENSAPLT00000015305

13214054 - 13235589

21536