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Intron Name: Anas_platyrhynchos_platyrhynchos_14_13243775_13243963_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

13243775 - 13243963

Intron Length:

189

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAACCTCA

5'SS Class:

weak_major

3'SS Sequence:

CTCCCCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAC

U12 Branch Point Sequence:

CTGTGCTGACTT

Flanking Amino Acid:

WMVLSPATMMALLVYNIIKY

Intron Amino Acid Position:

511

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.1

0.43

1.2

61.3

40.2

Major BPS

66.3

0.4

1.1

41.8

Major PPT

71.6

0.49

0.7

65.2

23.5

Minor 5ss

49.8

-0

2.5

62.8

43.7

Minor BPS

45.8

-0.2

2.1

63.95

46.9

Associated Gene:

Gene:

SLC6A7

Ensembl Gene ID:

ENSAPLG00000014083

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014684

13242780 - 13252369

9590