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Intron Name: Anas_platyrhynchos_platyrhynchos_14_13245899_13246176_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13245899 - 13246176

Intron Length:

278

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGGCT

5'SS Class:

strong_major

3'SS Sequence:

CGTGCTCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCCCAG

U12 Branch Point Sequence:

TTGCCCCCAGCT

Flanking Amino Acid:

ILKGVKSSGKVVYFTATFPY

Intron Amino Acid Position:

241

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.2

0.95

0.8

79.6

32.5

Major BPS

44.4

-0.3

1.6

54.3

42.9

Major PPT

68.9

0.42

0.9

61.8

34.9

Minor 5ss

31.9

-2.1

3.6

47.6

Minor BPS

46.9

-0.1

2.1

71.05

45.1

Associated Gene:

Gene:

SLC6A7

Ensembl Gene ID:

ENSAPLG00000014083

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014684

13242780 - 13252369

9590