Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_14_13246316_13246516_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13246316 - 13246516

Intron Length:

201

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACCGAGC

5'SS Class:

major

3'SS Sequence:

CCTTTGGCCCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAC

U12 Branch Point Sequence:

TCACCATCAGCT

Flanking Amino Acid:

NTVSPSEEYWSRYVLHIQGS

Intron Amino Acid Position:

194

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.2

0.38

1.3

58.9

Major BPS

69.8

0.49

1.1

71.3

36.7

Major PPT

65.8

0.36

0.9

57.5

38.6

Minor 5ss

37.1

-1.5

3.3

52.2

44.6

Minor BPS

45.7

-0.2

64.41

45.1

Associated Gene:

Gene:

SLC6A7

Ensembl Gene ID:

ENSAPLG00000014083

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014684

13242780 - 13252369

9590