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Intron Name: Anas_platyrhynchos_platyrhynchos_14_13248117_13251402_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13248117 - 13251402

Intron Length:

3286

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAGCC

5'SS Class:

strong_major

3'SS Sequence:

CCCTCTCTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCCCAT

U12 Branch Point Sequence:

CCTCTCCCATCC

Flanking Amino Acid:

KKIRQQHLRKPVTPELLVSP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

0.8

72.1

31.2

Major BPS

59.9

0.25

1.3

70.1

Major PPT

80.7

0.69

0.7

72.1

32.5

Minor 5ss

26.3

-2.7

3.1

33.4

Minor BPS

40.4

-0.7

1.9

48.11

41.6

Associated Gene:

Gene:

SLC6A7

Ensembl Gene ID:

ENSAPLG00000014083

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014684

13242780 - 13252369

9590