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Intron Name: Anas_platyrhynchos_platyrhynchos_14_13271731_13281774_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

13271731 - 13281774

Intron Length:

10044

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCCCT

5'SS Class:

strong_major

3'SS Sequence:

CTGATCTTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTGAT

U12 Branch Point Sequence:

TCATCCTGTACT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

75.3

40.8

Major BPS

83.5

0.83

0.8

71.6

36.4

Major PPT

69.2

0.43

1.1

65.2

Minor 5ss

40.5

-1.1

3.1

57.5

46.7

Minor BPS

61.1

0.43

1.8

77.88

43.9

Associated Gene:

Gene:

PDGFRB

Ensembl Gene ID:

ENSAPLG00000013101

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013696

13271616 - 13294113

22498