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Intron Name: Anas_platyrhynchos_platyrhynchos_14_13281853_13282708_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13281853 - 13282708

Intron Length:

856

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGTGGT

5'SS Class:

strong_major

3'SS Sequence:

GCTCCTCTCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTCAC

U12 Branch Point Sequence:

GAGGTCTCACCT

Flanking Amino Acid:

KALLWLLILTGLLEVTTGGS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

72.6

38.9

Major BPS

67.3

0.43

1.2

71.3

36.7

Major PPT

0.54

0.8

64.9

36.3

Minor 5ss

29.4

-2.4

3.2

40.9

45.4

Minor BPS

44.9

-0.3

1.9

57.45

45.2

Associated Gene:

Gene:

PDGFRB

Ensembl Gene ID:

ENSAPLG00000013101

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017202

13280865 - 13294113

13249

ENSAPLT00000013696

13271616 - 13294113

22498