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Intron Name: Anas_platyrhynchos_platyrhynchos_14_13286905_13287186_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13286905 - 13287186

Intron Length:

282

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAGAG

5'SS Class:

strong_major

3'SS Sequence:

CTCCCCTCTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCAGAT

U12 Branch Point Sequence:

CCTCTCAGATCT

Flanking Amino Acid:

LIILIVLWQKKPRYEIRWKV

Intron Amino Acid Position:

555

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

68.4

36.7

Major BPS

61.8

0.29

1.1

58.3

39.2

Major PPT

77.9

0.63

0.7

68.9

31.6

Minor 5ss

29.1

-2.4

3.4

37.5

47.2

Minor BPS

42.7

-0.4

1.9

58.66

44.2

Associated Gene:

Gene:

PDGFRB

Ensembl Gene ID:

ENSAPLG00000013101

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017202

13280865 - 13294113

13249

ENSAPLT00000013696

13271616 - 13294113

22498