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Intron Name: Anas_platyrhynchos_platyrhynchos_14_13288012_13288308_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13288012 - 13288308

Intron Length:

297

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

TGTCTCCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTCAT

U12 Branch Point Sequence:

AGGGACAAAATT

Flanking Amino Acid:

VNLLGACTKGGPIYIITEYC

Intron Amino Acid Position:

671

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

68.4

38.7

Major BPS

83.4

0.83

0.8

83.7

25.7

Major PPT

75.1

0.57

0.8

66.3

35.8

Minor 5ss

26.1

-2.7

2.9

22.8

37.4

Minor BPS

40.2

-0.6

52.8

42.3

Associated Gene:

Gene:

PDGFRB

Ensembl Gene ID:

ENSAPLG00000013101

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017202

13280865 - 13294113

13249

ENSAPLT00000013696

13271616 - 13294113

22498