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Intron Name: Anas_platyrhynchos_platyrhynchos_14_13292770_13292883_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13292770 - 13292883

Intron Length:

114

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TCCCTCCTGTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTAAG

U12 Branch Point Sequence:

TAAGCCACCAGC

Flanking Amino Acid:

MSKPTHASDEIYDIMQKCWE

Intron Amino Acid Position:

929

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

80.9

31.3

Major BPS

55.4

0.13

1.6

63.6

42.5

Major PPT

69.1

0.43

0.9

69.2

31.4

Minor 5ss

37.8

-1.4

3.3

55.2

42.1

Minor BPS

36.4

-1

2.2

45.58

42.5

Associated Gene:

Gene:

PDGFRB

Ensembl Gene ID:

ENSAPLG00000013101

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017202

13280865 - 13294113

13249

ENSAPLT00000013696

13271616 - 13294113

22498