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Intron Name: Anas_platyrhynchos_platyrhynchos_14_13293731_13293962_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13293731 - 13293962

Intron Length:

232

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAAAAA

5'SS Class:

strong_major

3'SS Sequence:

CGTCTCCCTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCTCAT

U12 Branch Point Sequence:

AGGGCCTCATTT

Flanking Amino Acid:

LPQEASISRASSMLNEANTS

Intron Amino Acid Position:

1044

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

79.3

28.7

Major BPS

64.6

0.36

1.3

67.6

40.6

Major PPT

76.7

0.6

0.8

69.7

Minor 5ss

32.1

-2

39.7

45.8

Minor BPS

-0.2

1.9

59.17

44.4

Associated Gene:

Gene:

PDGFRB

Ensembl Gene ID:

ENSAPLG00000013101

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017202

13280865 - 13294113

13249

ENSAPLT00000013696

13271616 - 13294113

22498