Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_14_13307087_13307900_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13307087 - 13307900

Intron Length:

814

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAACCGTG

5'SS Class:

major

3'SS Sequence:

GTCTCCTCCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

GTCTCCTCCACA

Flanking Amino Acid:

GVASVHLFVRDPDNVWYTPT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.6

0.6

1.2

67.1

44.6

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

74.9

0.56

0.8

68.5

31.9

Minor 5ss

45.5

-0.5

3.3

64.1

47.4

Minor BPS

54.9

0.15

68.35

43.9

Associated Gene:

Gene:

CSF1R

Ensembl Gene ID:

ENSAPLG00000013023

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013560

13307008 - 13320076

13069