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Intron Name: Anas_platyrhynchos_platyrhynchos_14_13308186_13308694_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13308186 - 13308694

Intron Length:

509

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGGAT

5'SS Class:

strong_major

3'SS Sequence:

TGTCTTTTTGTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTGAG

U12 Branch Point Sequence:

CTGTTGTTGAGT

Flanking Amino Acid:

SSRIRLIVEEAAEKPVSVTM

Intron Amino Acid Position:

122

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

75.4

34.2

Major BPS

57.3

0.18

1.6

57.1

49.4

Major PPT

84.7

0.78

0.7

80.8

31.2

Minor 5ss

30.2

-2.3

3.7

45.9

49.3

Minor BPS

46.2

-0.2

2.3

65.53

45.9

Associated Gene:

Gene:

CSF1R

Ensembl Gene ID:

ENSAPLG00000013023

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013560

13307008 - 13320076

13069