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Intron Name: Anas_platyrhynchos_platyrhynchos_14_13315210_13315688_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13315210 - 13315688

Intron Length:

479

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGAAAC

5'SS Class:

strong_major

3'SS Sequence:

GTTCCCTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTTAT

U12 Branch Point Sequence:

CATCTTATAAGC

Flanking Amino Acid:

WEFPRNNLQFGKTLGAGAFG

Intron Amino Acid Position:

505

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

0.9

76.9

31.6

Major BPS

82.6

0.81

0.8

71.7

Major PPT

0.68

0.8

73.6

31.4

Minor 5ss

33.9

-1.8

2.9

40.8

39.5

Minor BPS

45.1

-0.3

1.8

53.05

38.6

Associated Gene:

Gene:

CSF1R

Ensembl Gene ID:

ENSAPLG00000013023

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013560

13307008 - 13320076

13069