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Intron Name: Anas_platyrhynchos_platyrhynchos_14_13315794_13316086_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13315794 - 13316086

Intron Length:

293

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTAAG

5'SS Class:

strong_major

3'SS Sequence:

CCTTGTCTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTCAC

U12 Branch Point Sequence:

GCTCCCTCACCC

Flanking Amino Acid:

VLKVAVKMLKSSADTDEQEA

Intron Amino Acid Position:

540

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

34.8

Major BPS

60.1

0.25

1.1

62.9

34.3

Major PPT

82.5

0.73

0.8

76.3

32.3

Minor 5ss

37.5

-1.4

2.8

41.7

Minor BPS

49.5

-0

1.9

61.01

43.9

Associated Gene:

Gene:

CSF1R

Ensembl Gene ID:

ENSAPLG00000013023

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013560

13307008 - 13320076

13069