Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_14_13318650_13318934_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13318650 - 13318934

Intron Length:

285

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTAAC

5'SS Class:

strong_major

3'SS Sequence:

GTTACTGTCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTTAC

U12 Branch Point Sequence:

ACCTCTGTTACT

Flanking Amino Acid:

GILLWEIFSLGKSPYPGMVV

Intron Amino Acid Position:

783

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.8

83.2

28.5

Major BPS

59.1

0.23

1.2

52.7

42.9

Major PPT

71.4

0.48

64.4

41.4

Minor 5ss

36.2

-1.6

2.7

42.6

38.5

Minor BPS

46.9

-0.1

2.3

65.38

45.5

Associated Gene:

Gene:

CSF1R

Ensembl Gene ID:

ENSAPLG00000013023

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013560

13307008 - 13320076

13069