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Intron Name: Anas_platyrhynchos_platyrhynchos_14_13325122_13325478_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13325122 - 13325478

Intron Length:

357

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAAGG

5'SS Class:

strong_major

3'SS Sequence:

CCTTTCTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CACTAAT

U12 Branch Point Sequence:

GTGGCACTAATC

Flanking Amino Acid:

GKVYKVCPHQVVCGSKYIVR

Intron Amino Acid Position:

652

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.9

71.5

40.2

Major BPS

74.4

0.61

0.9

73.6

28.6

Major PPT

87.9

0.85

0.7

80.1

31.9

Minor 5ss

27.4

-2.6

2.7

31.3

42.4

Minor BPS

46.1

-0.3

56.97

41.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005491

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005714

13323975 - 13335250

11276